Introduction

The website with the training material can be run locally. Sometimes, it is also interesting to freeze the tutorials or to get PDFs of the tutorials.

Agenda

In this tutorial, you will learn how to run a local instance of the GTN website:

1. Introduction
2. Generate PDFs artifact

Generate PDFs artifact

To generate the PDFs, a command make pdf is given. This command:

• Launches a detached Jekyll server to serve the website
• Generates the PDFs of the tutorials by calling Chrome via command line
• Generates the PDFs of the slide decks by calling decktape

Hands-on: Checking the website generation locally

1. Install a browser
2. Generate the PDFs: make pdf
3. Check the generated PDFs in _pdf folder

Key points

• PDFs can be easily generated for the different tutorials to share with learnees or to keep a fixed version of a tutorial

Frequently Asked Questions

Have questions about this tutorial? Check out the tutorial FAQ page or the FAQ page for the Contributing to the Galaxy Training Material topic to see if your question is listed there. If not, please ask your question on the GTN Gitter Channel or the Galaxy Help Forum

Feedback

Did you use this material as an instructor? Feel free to give us feedback on how it went.
Did you use this material as a learner or student? Click the form below to leave feedback.

Citing this Tutorial

1. Bérénice Batut, Generating PDF artefacts of the website (Galaxy Training Materials). https://training.galaxyproject.org/training-material/topics/contributing/tutorials/generating-pdf/tutorial.html Online; accessed TODAY
2. Batut et al., 2018 Community-Driven Data Analysis Training for Biology Cell Systems 10.1016/j.cels.2018.05.012

BibTeX

@misc{contributing-generating-pdf,
author = "Bérénice Batut",
title = "Generating PDF artefacts of the website (Galaxy Training Materials)",
year = "",
month = "",
day = ""
url = "\url{https://training.galaxyproject.org/training-material/topics/contributing/tutorials/generating-pdf/tutorial.html}",
note = "[Online; accessed TODAY]"
}
@article{Batut_2018,
    doi = {10.1016/j.cels.2018.05.012},
    url = {https://doi.org/10.1016%2Fj.cels.2018.05.012},
    year = 2018,
    month = {jun},
    publisher = {Elsevier {BV}},
    volume = {6},
    number = {6},
    pages = {752--758.e1},
    author = {B{\'{e}}r{\'{e}}nice Batut and Saskia Hiltemann and Andrea Bagnacani and Dannon Baker and Vivek Bhardwaj and Clemens Blank and Anthony Bretaudeau and Loraine Brillet-Gu{\'{e}}guen and Martin {\v{C}}ech and John Chilton and Dave Clements and Olivia Doppelt-Azeroual and Anika Erxleben and Mallory Ann Freeberg and Simon Gladman and Youri Hoogstrate and Hans-Rudolf Hotz and Torsten Houwaart and Pratik Jagtap and Delphine Larivi{\`{e}}re and Gildas Le Corguill{\'{e}} and Thomas Manke and Fabien Mareuil and Fidel Ram{\'{\i}}rez and Devon Ryan and Florian Christoph Sigloch and Nicola Soranzo and Joachim Wolff and Pavankumar Videm and Markus Wolfien and Aisanjiang Wubuli and Dilmurat Yusuf and James Taylor and Rolf Backofen and Anton Nekrutenko and Björn Grüning},
    title = {Community-Driven Data Analysis Training for Biology},
    journal = {Cell Systems}
}
                   

Congratulations on successfully completing this tutorial!

Developing GTN training material

This tutorial is part of a series to develop GTN training material, feel free to also look at:

1. Overview of the Galaxy Training Material
2. Adding auto-generated video to your slides
3. Adding Quizzes to your Tutorial
4. Contributing with GitHub via command-line
5. Contributing with GitHub via its interface
6. Creating a new tutorial
7. Creating content in Markdown
8. Creating Interactive Galaxy Tours
9. Creating Slides
10. Design and plan session, course, materials
11. Generating PDF artefacts of the website
12. GTN Metadata
13. Including a new topic
14. Principles of learning and how they apply to training and teaching
15. Running the GTN website locally
16. Running the GTN website online using GitPod
17. Teaching Python
18. Tools, Data, and Workflows for tutorials
19. Updating diffs in admin training