| CHROM
| POS
| TYPE
| REF
| ALT
| EVIDENCE
| FTYPE
| STRAND
| NT_POS
| AA_POS
| EFFECT
| LOCUS_TAG
| GENE
| PRODUCT
|
| Wildtype
| 24388
| snp
| A
| G
| G:22 A:0
| CDS
| +
| 1/702
| 1/233
| initiator_codon_variant c.1A>G p.Met1?
| WILD_00022
| walR
| Transcriptional regulatory protein WalR
|
| Wildtype
| 29479
| snp
| T
| G
| G:21 T:0
| CDS
| +
| 39/792
| 13/263
| synonymous_variant c.39T>G p.Gly13Gly
| WILD_00026
| yycJ
| Putative metallo-hydrolase YycJ
|
| Wildtype
| 47299
| snp
| T
| A
| A:24 T:0
| CDS
| +
| 54/1758
| 18/585
| stop_gained c.54T>A p.Cys18*
| WILD_00043
| mecR1
| Methicillin resistance mecR1 protein
|
| Wildtype
| 102969
| snp
| G
| C
| C:16 G:0
| CDS
| -
| 87/1281
| 29/426
| synonymous_variant c.87C>G p.Gly29Gly
| WILD_00093
| spa
| Immunoglobulin G-binding protein A
|
| Wildtype
| 103048
| snp
| T
| A
| A:20 T:0
| CDS
| -
| 8/1281
| 3/426
| missense_variant c.8A>T p.Lys3Met
| WILD_00093
| spa
| Immunoglobulin G-binding protein A
|
| Wildtype
| 103379
| del
| GAA
| GA
| GA:11 GAA:0
|
| Wildtype
| 106602
| snp
| T
| G
| G:21 T:0
| CDS
| -
| 993/993
| 331/330
| stop_lost&splice_region_variant c.993A>C p.Ter331Tyrext*?
| WILD_00097
| yfiY
| putative siderophore-binding lipoprotein YfiY
|
| Wildtype
| 109833
| snp
| T
| A
| A:16 T:0
| CDS
| +
| 1/1755
| 1/584
| initiator_codon_variant c.1T>A p.Leu1?
| WILD_00100
| iucC_1
| Aerobactin synthase
|
| Wildtype
| 114540
| del
| ATT
| AT
| AT:25 ATT:0
| CDS
| +
| 1717/1737
| 573/578
| frameshift_variant c.1717delT p.Cys573fs
| WILD_00102
| iucA
| N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase
|
| Wildtype
| 129881
| mnp
| GT
| AA
| AA:18 GT:0
| CDS
| +
| 55/708
| 19/235
| missense_variant c.55_56delGTinsAA p.Val19Asn
| WILD_00117
| deoD
| Purine nucleoside phosphorylase DeoD-type
|
| Wildtype
| 138877
| snp
| G
| C
| C:14 G:0
| CDS
| +
| 1119/1545
| 373/514
| missense_variant c.1119G>C p.Trp373Cys
| WILD_00125
|
| hypothetical protein
|
| Wildtype
| 138920
| snp
| A
| G
| G:10 A:0
| CDS
| +
| 1162/1545
| 388/514
| missense_variant c.1162A>G p.Lys388Glu
| WILD_00125
|
| hypothetical protein
|
| Wildtype
| 160547
| del
| GTC
| GC
| GC:18 GTC:0
|
| Wildtype
| 160552
| del
| CTA
| CA
| CA:20 CTA:0
|
| Wildtype
| 190866
| del
| GTT
| GT
| GT:18 GTT:0
| CDS
| -
| 28/1356
| 10/451
| frameshift_variant c.28delA p.Asn10fs
| WILD_00166
| brnQ
| Branched-chain amino acid transport system 2 carrier protein
|